Insertion junction: CLIP2.061950_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.061950
Chromosome:chromosome 4
Location:2760401
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g223600 (1 of 1) IPR000104//IPR003072//IPR013328 - Antifreeze protein, type I // Orphan nuclear receptor, NOR1 type // 6-phosphogluconate dehydrogenase, domain 2 3'UTR
Cre04.g223650 FAP30 (1 of 1) PF02494 - HYR domain (HYR); Flagellar Associated Protein 30 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAAACCTTGGCCCACAGCTGTAAACAACTGGTTTACTTGGCTCACGCGT
Internal bar code:CCAGTTATATACCGCGCTTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2644
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:CTTATGCCACATCACACGCG
Suggested primer 2:GAGGGCGAGTTGTGGTGTAA