Insertion junction: CLIP2.061952_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.061952
Chromosome:chromosome 8
Location:2966993
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g374800 (1 of 1) PTHR16288//PTHR16288:SF0 - WD40 REPEAT PROTEIN 4 // TRNA (GUANINE-N(7)-)-METHYLTRANSFERASE NON-CATALYTIC SUBUNIT WDR4 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCTTAAAATGGCTTCGATTAGTTGACGAAACAGGCTGCCGCCGCTTCG
Internal bar code:GTCGTGATTTCGCTTAAGTCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:960
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TCAGCAACGAAGCCAAAACG
Suggested primer 2:CTCATCACACCACCACCCTC