Insertion junction: CLIP2.061955_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.061955
Chromosome:chromosome 6
Location:7170238
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g298450 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATTCTGTACCCCTCGCCCTTTTCGCTCCCATTCCGTGAACATCGCTCAG
Internal bar code:GCCGTTGCCCTCCTACGGTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2567
LEAP-Seq percent confirming:69.4444
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCAGAGAGCTACCCGTTA
Suggested primer 2:CGTAGGGTGAGGGGTAGGAA