Insertion junction: CLIP2.061958_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.061958
Chromosome:chromosome 9
Location:5075975
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g406150 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCCCTACCTGCTTCATCCAGGGCAGGCCCCACTGGGCAGGCCCCCTTC
Internal bar code:CCCATCGATCTGATTGAAATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:4409
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:CCAATGTTCGTCCTCGTCCA
Suggested primer 2:GCTGTTTTCTTCTGCACGCA