Insertion junction: CLIP2.061971_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.061971
Chromosome:chromosome 6
Location:3194401
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g276250 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCGATGTGTATTTGTAGCAGCGACTATGGGCCCTTCCTGAGCACCCCGA
Internal bar code:AGAGGGAACTGAGGAGGCAGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2545
LEAP-Seq percent confirming:30.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CATCCTACGCCATTTGCACG
Suggested primer 2:CCGCCATGTTGAGTTGCAAA