Insertion junction: CLIP2.061971_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.061971
Chromosome:chromosome 6
Location:3194403
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g276250 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAAGTGAAATGCTTTCTTATCAATATGTCTGAGCCTGTGCGCAAAAAAG
Internal bar code:AGAGGGAACTGAGGAGGCAGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:4434
LEAP-Seq percent confirming:37.5
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCCATGTTGAGTTGCAAA
Suggested primer 2:CATCCTACGCCATTTGCACG