Insertion junction: CLIP2.061973_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.061973
Chromosome:chromosome 17
Location:1142370
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g704150 GDPD5,GDP5 Glycerophosphoryl diester phosphodiesterase family protein; (1 of 5) PTHR23344//PTHR23344:SF7 - GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE // GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTATGGCGCACATGCAGTTTTATTGAGCACGAGTTTCATCTCTGCTCCTC
Internal bar code:GATGTGGGAGAACATTAGACTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1886
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGACGCGTAGTGGAGAGC
Suggested primer 2:CTGCATCTGAATCGCAGTGC