Insertion junction: CLIP2.061981_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.061981
Chromosome:chromosome 6
Location:8018233
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g304800 (1 of 1) PTHR11216//PTHR11216:SF61 - EH DOMAIN // GH06923P 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGAAATGGAGGGGAGGGTAACCGATTTTGCCCCATGCTCAGAGCCCTGCT
Internal bar code:GAATATGTGTACAAAACGTTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2725
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCCGAAGAGAACTGGAAC
Suggested primer 2:CTCAAGTGCTTCCCCAGGAG