Insertion junction: CLIP2.061982_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.061982
Chromosome:chromosome 13
Location:1708078
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g574250 MLTK1,MLTK (1 of 4) IPR000719//IPR001245//IPR002290//IPR006189//IPR011009//IPR020635 - Protein kinase domain // Serine-threonine/tyrosine-protein kinase catalytic domain // Serine/threonine/dual specificity protein kinase, catalytic domain // CHASE domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain; mitogen activated kinase 3'UTR
Cre13.g574300 (1 of 4) IPR000719//IPR001245//IPR002290//IPR006189//IPR011009//IPR020635 - Protein kinase domain // Serine-threonine/tyrosine-protein kinase catalytic domain // Serine/threonine/dual specificity protein kinase, catalytic domain // CHASE domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAATCCTCTCAAGCCACCGCACGTATCATACAAGGTTACCAACCACAGC
Internal bar code:TTGGGCGTAGTTACGGAATGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:5006
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:158
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:158

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCTAGCATGCAGGACATA
Suggested primer 2:TGGCTGTATGGCTCAGTTGG