Insertion junction: CLIP2.061985_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.061985
Chromosome:chromosome 13
Location:3130674
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g584800 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGAAGATGGGGTGCTCGTGTGCCATGTGTTTGGACCGAGCGGCGGCTC
Internal bar code:TAATATTGAGTCTATTTGGCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3042
LEAP-Seq percent confirming:96.1538
LEAP-Seq n confirming:75
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:78

Suggested primers for confirmation by PCR

Suggested primer 1:ACCGCATTAACGTCACCAGT
Suggested primer 2:CATGTGTGCAGGTTTGTGGG