Insertion junction: CLIP2.061991_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.061991
Chromosome:chromosome 4
Location:2128863
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g219796 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATACAACTGTGTGCATACGACGTGAGCCCGATACAGATATGAGCGAAA
Internal bar code:TGTAGCGGATACTTCGAGCCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1692
LEAP-Seq percent confirming:97.7778
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGCCATATGCAACGTCTG
Suggested primer 2:TTTGCGTGGCAGAGCTTAGA