Insertion junction: CLIP2.061998_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.061998
Chromosome:chromosome 4
Location:2363888
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g221150 GT90-5,GT90F5 GT90 family protein 5; (1 of 52) PF05686 - Glycosyl transferase family 90 (Glyco_transf_90) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACAAGTGCAAGGGCGGGGGATGAGCGTTCCCTGTGCGCACAGACACAGG
Internal bar code:TAGCAGCTCAGGCGCTAAGAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2243
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCACCCAGCGTCTATTTT
Suggested primer 2:GCGGTGTGACTTTGTGTTCC