Insertion junction: CLIP2.062000_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.062000
Chromosome:chromosome 9
Location:1000931
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g402500 ATPVA2,ATPvA2 Vacuolar ATP synthase subunit A; (1 of 3) K02154 - V-type H+-transporting ATPase subunit a (ATPeV0A, ATP6N) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGAGGGGAGTGCATGAGCGTGTGACTGAGTGATCTTTCTCTTTCGAAC
Internal bar code:TCAATAAGACGCCAAGGGACTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1833
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGCTAGTGCTAGTGTCCG
Suggested primer 2:GGGTGACGGCTACAAGTTCA