Insertion junction: CLIP2.062001_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.062001
Chromosome:chromosome 13
Location:5171675
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g607300 FAP352,MAPK5 (1 of 1) K08293 - mitogen-activated protein kinase [EC:2.7.11.24] (E2.7.11.24); Flagellar Associated Protein 352 3'UTR
Cre13.g607350 CAH7 (1 of 2) PTHR11002:SF13 - BETA CARBONIC ANHYDRASE 1; Carbonic anhydrase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACCAAGGAGGTGGCTGCCTTGGCAGGAAAAGGGCTGATCCCGGGTCGTT
Internal bar code:GATATGATTTCTCGTCTGGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2003
LEAP-Seq percent confirming:94.2857
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGTTGTGGTGGGATAGAC
Suggested primer 2:AAGAAGAAGGAGGTGGTGCG