Insertion junction: CLIP2.062005_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.062005
Chromosome:chromosome 12
Location:7619262
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g555750 CPK7 (1 of 13) PTHR10584 - SUGAR KINASE; putative carbohydrate kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACTTGGTTTCGAAGACTGCACAGAGTAGACAGGAGACGAGTGTGAGGGC
Internal bar code:GTGACTCCGGTCGGCGAGAGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1615
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGAGTCCTTGACCAGCAT
Suggested primer 2:CGTGGCTACTGTGACCTTGT