Insertion junction: CLIP2.062006_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.062006
Chromosome:chromosome 3
Location:2846972
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre03.g162250 RAD1,CGL35,RAD17 Conserved in the Green Lineage; (1 of 1) K02830 - cell cycle checkpoint protein (HRAD1, RAD17) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCGCGAGCGGTCCTCGGCTTTGCGAACGTGCGCAGCTTTGCGGCCGCGC
Internal bar code:TTGATCTTGGTGGGGTGTTAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:814
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTCTACGAATTCCGACCG
Suggested primer 2:GTTGTCTCTGGTCGTGTCGT