Insertion junction: CLIP2.062007_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.062007
Chromosome:chromosome 2
Location:7835403
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g146200 (1 of 89) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) 3'UTR
Cre02.g146250 NFS1,NIFS1,CSD1 (1 of 1) PTHR11601:SF34 - CYSTEINE DESULFURASE, MITOCHONDRIAL; Cysteine desulfurase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGAATCCGCATCCATGCAAGGAAACTTCGGAAAGACACACACATGGGT
Internal bar code:GGGCAATCGCAATCAAAGCTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3870
LEAP-Seq percent confirming:98.5507
LEAP-Seq n confirming:68
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:69

Suggested primers for confirmation by PCR

Suggested primer 1:GACTTGTTGGTCGGTGTTGC
Suggested primer 2:CCAATGCACTGGTGTGTGTG