Insertion junction: CLIP2.062012_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.062012
Chromosome:chromosome 9
Location:4606422
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g401589 (1 of 2) IPR000104//IPR002893//IPR003072 - Antifreeze protein, type I // Zinc finger, MYND-type // Orphan nuclear receptor, NOR1 type 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATTCAACACAACGCCTAGCTAGTCGTTTGGTCGCAACGCCCCTGGCGAT
Internal bar code:ATCACTTGAGAGGGAGGCCCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2579
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CTGAGAGTATCCGAGCGCAG
Suggested primer 2:AACATGTGTCTAGCAGGGCC