Insertion junction: CLIP2.062015_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.062015
Chromosome:chromosome 8
Location:1191852
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g363250 (1 of 3) IPR000104//IPR006553 - Antifreeze protein, type I // Leucine-rich repeat, cysteine-containing subtype 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCAACTCCAGTCATGGTGGAGAGCCAACCTGCGTTGAGACGCGCACTG
Internal bar code:TCTAATTGTTCGTATCGGGCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2819
LEAP-Seq percent confirming:91.4286
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTGACCTGCTAGCAGTG
Suggested primer 2:CGAGTATGTTGACAAGCGCG