Insertion junction: CLIP2.062015_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.062015
Chromosome:chromosome 8
Location:1191857
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g363250 (1 of 3) IPR000104//IPR006553 - Antifreeze protein, type I // Leucine-rich repeat, cysteine-containing subtype 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAGATTAATTGCCGCAATGTGGTAGCAAATTGTTGGCTGTCCACTGAA
Internal bar code:TCTAATTGTTCGTATCGGGCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1615
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGTATGTTGACAAGCGCG
Suggested primer 2:TGTGTGACCTGCTAGCAGTG