Insertion junction: CLIP2.062020_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.062020
Chromosome:chromosome 9
Location:3262779
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g394917 (1 of 4) PTHR16255//PTHR16255:SF4 - UNCHARACTERIZED // SPORULATION PROTEIN RMD8 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTCCACTTCTACAGTTCTGGCTGTCATACGCAGAGTAAAAGACACAGT
Internal bar code:TATGTCAGTGAGAGGTCGTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1745
LEAP-Seq percent confirming:97.0588
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:GCAAGCCCAACTTTGCATGA
Suggested primer 2:AACATGTGCATTCCCTCCGT