Insertion junction: CLIP2.062021_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.062021
Chromosome:chromosome 13
Location:4092557
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g591000 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAGAGCCGCAGGCATACATGGACTAACAGGGGTTTCCCCTGTAGAATA
Internal bar code:AGGGGCTACCGTTCCCTGTCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:425
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GCCGACTATCCTGCTACACC
Suggested primer 2:GTGCGCAAATGAGACGGATC