Insertion junction: CLIP2.062025_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.062025
Chromosome:chromosome 8
Location:2481796
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g372300 (1 of 1) IPR000104//IPR000620 - Antifreeze protein, type I // EamA domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCACCCTGGTGCGCAACGGGAATTAAGGGACTCAGTGGCCATACGGGGT
Internal bar code:GGTGTTTTATCATGACGACTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1677
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGGGGTTAATGTGGGTGA
Suggested primer 2:ATCGGTAGACGGACAATCGC