Insertion junction: CLIP2.062027_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.062027
Chromosome:chromosome 17
Location:4413106
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g730700 (1 of 1) PTHR11732//PTHR11732:SF2 - ALDO/KETO REDUCTASE // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCCGTGGGTGTGACCAGCAGACGTAGGGACGGTGGAGTAACCGGGTTG
Internal bar code:TGTGCGTGGTGTCATGACTCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2018
LEAP-Seq percent confirming:80.7692
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CATTTTTGCGCCCTGTGTCA
Suggested primer 2:TCCTAGCCCCTTCAAAAGCG