Insertion junction: CLIP2.062029_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.062029
Chromosome:chromosome 2
Location:6543905
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g389089 CNX5,NOFNIR1,NOFNiR,ARC1 NO-forming nitrite reductase; (1 of 1) PTHR14237:SF30 - MITOCHONDRIAL AMIDOXIME-REDUCING COMPONENT 1 5'UTR
Cre09.g389100 GOT1 (1 of 3) PF04178 - Got1/Sft2-like family (Got1); Got1, COPII vesicle component 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATACGCTTTCTGCAGAATGCGATTGTGATTTTAACAAATATAGCTCGCA
Internal bar code:TTGTGGTCCGGGGGCGGGGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3127
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:AACTCATTGCCCCCATTCGT
Suggested primer 2:GCCGTATGCTTCGAGGATCA