Insertion junction: CLIP2.062029_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.062029
Chromosome:chromosome 2
Location:6543913
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g389089 CNX5,NOFNIR1,NOFNiR,ARC1 NO-forming nitrite reductase; (1 of 1) PTHR14237:SF30 - MITOCHONDRIAL AMIDOXIME-REDUCING COMPONENT 1 5'UTR
Cre09.g389100 GOT1 (1 of 3) PF04178 - Got1/Sft2-like family (Got1); Got1, COPII vesicle component 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAGTAGCTGTCCCTCTGGGGCCCCAAGTCGTTTAGAAGCACAATTGCAG
Internal bar code:AGACTTTAGGCGCGCGGGACTA

Confirmation - LEAP-Seq

LEAP-Seq distance:871
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GCCGTATGCTTCGAGGATCA
Suggested primer 2:AACTCATTGCCCCCATTCGT