Insertion junction: CLIP2.062030_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.062030
Chromosome:chromosome 16
Location:4554001
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g671350 ARS2 (1 of 2) IPR012083 - Arylsulfatase; Periplasmic arylsulfatase 2 5'UTR
lncRNA_TCONS_00091459 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTGTGCAGTACAAGGGCATTTTCCAGTGGATGCTGTCTCACGCTTTAC
Internal bar code:TTATTAAAGATTCCGGAAAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1031
LEAP-Seq percent confirming:93.1034
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:TCATCCTACGGGAGCAAGGA
Suggested primer 2:AGCAATATGGCCGCCTTTCT