Insertion junction: CLIP2.062040_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.062040
Chromosome:chromosome 12
Location:9245214
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g542750 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCATGAAGAATGTGTATGCACTTCAGCAGCACCCCTGCTGACGGCCAGG
Internal bar code:GCGGCTGTTCGCTTCTCGTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2655
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGTTTTGGCGTCACACAT
Suggested primer 2:CTTGCAAGGGAAAAGTGGGC