Insertion junction: CLIP2.062043_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.062043
Chromosome:chromosome 3
Location:671273
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g145747 SHK7,SHKH1 (1 of 1) 4.2.3.5 - Chorismate synthase / 5-enolpyruvylshikimate-3-phosphate phospholyase; Chorismate synthase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGGACGCAGGGATGTGGAAATCCGTTGCATCAGGTTGCGTGAGCCCCG
Internal bar code:CCTTTAAATTTACTTTAGTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1183
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGAGGGGTTCTGACAAGG
Suggested primer 2:GTGTTTGTATGGAGCGGGGA