Insertion junction: CLIP2.062046_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.062046
Chromosome:chromosome 3
Location:6819146
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g197300 3'UTR
Cre03.g197350 CDC5 (1 of 1) K12860 - pre-mRNA-splicing factor CDC5/CEF1 (CDC5L, CDC5, CEF1); Cell Division Cycle 5 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGACCACTCCGACTGTTCGCGGGTTTCAGTTGTTTACGTGACGCATCA
Internal bar code:AACTAATAGTGAACACGAGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3274
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:68
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:CCCACGTTCCTGAACCTCTC
Suggested primer 2:CATGCCCCATCAAGGACTGT