Insertion junction: CLIP2.062049_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.062049
Chromosome:chromosome 10
Location:4443872
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre10.g801169 (1 of 39) PTHR13078//PTHR13078:SF53 - FAMILY NOT NAMED // PROTEIN MAOC-1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTATCTTGGTAGGGCCAACAGCGGACTCGCCACCGGCCTCACCCTAGCTT
Internal bar code:GAATGGAATGGGACCTTCGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:879
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:AGTAGGTGCCCTAGATGCCA
Suggested primer 2:GGCAACCCAGCTTCAACTTG