Insertion junction: CLIP2.062049_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.062049
Chromosome:chromosome 13
Location:1498335
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g572600 (1 of 5) IPR001214//IPR003616 - SET domain // Post-SET domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCACGCCGTGGCCTGAAAGCCCCACCTTTGTGCGGCTTGACCGGACAT
Internal bar code:AGATATCTTAAAACATGATTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2231
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GAATCATTCGCTGTGTCCGC
Suggested primer 2:GCACCAAACCGCTTCATGTT