Insertion junction: CLIP2.062050_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.062050
Chromosome:contig 27
Location:10767
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre27.g802186 (1 of 77) IPR029071 - Ubiquitin-related domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTCTTCTGGGCTTGTGTCTTCCGGGGCCGCCAACCGTTCCAGTAAAGA
Internal bar code:TTGGAGCCTCCCGTGCGGGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4795
LEAP-Seq percent confirming:0.775194
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:128
LEAP-Seq n unique pos:129

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGCATCGTCATACGGCAC
Suggested primer 2:GTCACATTGACGGGGGATGT