Insertion junction: CLIP2.062054_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.062054
Chromosome:chromosome 17
Location:3350887
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g722900 (1 of 781) IPR000104 - Antifreeze protein, type I outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTGCAAGGCCTGCAACTCGTATGCCTATGCACATAGGCGTCAGGCGCC
Internal bar code:CTTCTTAACGTGTTCTCCGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1194
LEAP-Seq percent confirming:89.4737
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TCACAGCGCCACTCGTAATT
Suggested primer 2:TAGTATTGCCGCAATCCCCC