Insertion junction: CLIP2.062056_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.062056
Chromosome:chromosome 16
Location:319212
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g694206 (1 of 6) IPR006502//IPR011333 - Protein of unknown function PDDEXK-like // POZ domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTAAAGAACGAGAGGCCAAGAAAGGCTGCGGATTGACCCCTAGCTGCGA
Internal bar code:TTTGTTTGCAATATCAGAGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:971
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:AACTTCGAGCTTCACGTCGT
Suggested primer 2:TCCATCTCCTACACCCAGGG