Insertion junction: CLIP2.062057_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.062057
Chromosome:chromosome 6
Location:2642461
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g270250 CDC45,DIV65 (1 of 1) K06628 - cell division control protein 45 (CDC45); Cell Division Cycle protein 45 3'UTR
Cre06.g800644 gene_edge/mRNA_edge/3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGCATATGGTACCTCGAGCCACGCTAGGCCAGTCCGTCTATATGTCTA
Internal bar code:CTACCTCGTAGATTTTGCCGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2902
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:AACAGTTCCCTCTTCCTGCG
Suggested primer 2:TGTGTGCTGGGTCTTGGTTT