Insertion junction: CLIP2.062058_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.062058
Chromosome:chromosome 1
Location:337480
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g001950 Predicted protein with 3-phosphoshikimate1-carboxyvinyltransferase core domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACGAACAGTCCACGGGCGCGGCGCTGTACACACACTGCGACCATCCCCG
Internal bar code:ATGAACGGGATCCGACGGCTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1590
LEAP-Seq percent confirming:97.1429
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:AACAAGAACACAGCAACGGC
Suggested primer 2:CAGTTGCCTCACAAGTTGCC