Insertion junction: CLIP2.062059_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.062059
Chromosome:chromosome 3
Location:4990139
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g179550 TF2H2 (1 of 1) K03142 - transcription initiation factor TFIIH subunit 2 (TFIIH2, GTF2H2, SSL1); Transcription factor TFIIH, 44 kDa subunit 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGACTTGTGAAGGCTGCGTGCTCCTTCGTGATTACTATGCCGCCAAGG
Internal bar code:ACGTTGTTTTTAGCGTAGTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2423
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:111
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:111

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTGCGCAGATAAGCAGTT
Suggested primer 2:CACATAGCGGATCATGCCCT