Insertion junction: CLIP2.062066_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.062066
Chromosome:chromosome 9
Location:2991828
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g393432 (1 of 1) IPR002421//IPR029060 - 5'-3' exonuclease, N-terminal // PIN domain-like 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGGGTGGAAAGCCTCGAGCAGTTGCCTGAAAAGTGTACGCAATCCGAG
Internal bar code:GATTTGATGTGATGCAGCCAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1489
LEAP-Seq percent confirming:96.5517
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTACGTACTACCAGGGCT
Suggested primer 2:CAGCCATTTGTCTTCGCCAC