Insertion junction: CLIP2.062072_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.062072
Chromosome:chromosome 3
Location:8809059
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g206817 (1 of 2) IPR001739//IPR016177 - Methyl-CpG DNA binding // DNA-binding domain outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTGCAGTCCGCCACTACGCTTCCCGCATACATTTCACCCTCTTGTTGT
Internal bar code:TCAGGACGTCTTCCTACAACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1709
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCCCGTTCTGCATTGTAT
Suggested primer 2:CTTGCTGTTGCTGCAGTCAG