Insertion junction: CLIP2.062075_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.062075
Chromosome:chromosome 17
Location:2990560
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre17.g719771 (1 of 4) PF12576 - Protein of unknown function (DUF3754) (DUF3754) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGAGATGGAGGTGGGGGTAGTTGAACCAGAACATTGACTACCATTGTC
Internal bar code:GGAAATTAAACCGTGCTAATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:132
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCATCTACAGGGACATCC
Suggested primer 2:GCATCAAAGAGCAGCAAGGG