Insertion junction: CLIP2.062085_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.062085
Chromosome:chromosome 3
Location:8334604
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g199100 (1 of 7) IPR001606 - ARID DNA-binding domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGCTTCTTGCCCTGCTGACACGTGCTCATGAGACGCAAGAGGCAGTAG
Internal bar code:GGGTCCAGATAAGTGATGAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:2185
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGCAAACGGATGGATAAG
Suggested primer 2:GGAAGTTGGAGGGTCTGTGG