Insertion junction: CLIP2.062086_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.062086
Chromosome:chromosome 3
Location:6792790
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g197000 POB8 (1 of 1) K14847 - ribosome production factor 2 (RPF2); Proteome of basal body 8 3'UTR
Cre03.g197050 HTV2 (1 of 35) K11253 - histone H3 (H3); Histone H3 variant 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCTCAAAGTAGTGCCGCACCATCGCGTTCTGGAACAGCTTACAGTGTC
Internal bar code:AATCTCGGCAAGATTTCCTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:5161
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:CGCAGCAAAAGAACGTGTCA
Suggested primer 2:AGGTGGCTGGGTTGATAACG