Insertion junction: CLIP2.062098_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.062098
Chromosome:chromosome 6
Location:8344400
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g307450 SPL1 (1 of 1) K12825 - splicing factor 3A subunit 1 (SF3A1, SAP114); SF3A1 splicing factor 3a, subunit 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACATGCCACTTGTTACAGGCGCACTCTCCCGTCGGCCTGGACGTCCGGGC
Internal bar code:GCCTCTGGTAGTCTCTCTCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1464
LEAP-Seq percent confirming:95.6522
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:AACGAGAAGCTCATTGGCCA
Suggested primer 2:ATATTGTGCGCTGTGTGGGA