Insertion junction: CLIP2.062109_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.062109
Chromosome:chromosome 12
Location:3369920
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g498150 (1 of 2) PTHR22847//PTHR22847:SF431 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAAAGTTAGGCGGCGGGGCCAGCCACTGCACATGAGGAACCTTGACGG
Internal bar code:TGCTGAGAGTTTATTACAAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3567
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:96
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:96

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGGGCGTGTAAAGGAGTG
Suggested primer 2:GTAGCATCGATGTGGGAGGG