Insertion junction: CLIP2.062113_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.062113
Chromosome:chromosome 17
Location:4225903
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g729450 CLV2 Voltage-gated chloride channel; (1 of 1) PTHR11689//PTHR11689:SF94 - CHLORIDE CHANNEL // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGTGTGAGCGCTGTAAAAGTGTTCTCCCAGGATCCGTTCGGTGCAGGG
Internal bar code:TGCGCCCGCACAGAGTATGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1687
LEAP-Seq percent confirming:92.5
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:CACGCACTTCGCAGTATTCG
Suggested primer 2:TGAAGGTCGTGTCGTGTGAG