Insertion junction: CLIP2.062121_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.062121
Chromosome:chromosome 2
Location:7479667
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g392505 (1 of 4) PTHR22849//PTHR22849:SF39 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED 3'UTR
Cre09.g392542 (1 of 1) K11423 - histone-lysine N-methyltransferase SETD2 (SETD2, SET2) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCACACGAACCAAAATTATGCTTGCGTCCCTTCCATACGCGCAAGCCAG
Internal bar code:TTGGCGGATAAAATCGCAACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1852
LEAP-Seq percent confirming:92.1875
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGCACAGTATTGGAGGGC
Suggested primer 2:CTACGAGTAGGCTCTGCAGC