Insertion junction: CLIP2.062126_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.062126
Chromosome:chromosome 6
Location:5087986
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre06.g282550 CDS
lncRNA_TCONS_00144090 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACTACACCTTCTATGACGTCTTCTTCTGGCGCGATGCACCTGATTGGTA
Internal bar code:GGACATTGCTATCCAAGTAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:435
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GTGATATGAGGGAGCCACGG
Suggested primer 2:TACGACTGCGAGGGTCCTTA