Insertion junction: CLIP2.062128_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.062128
Chromosome:chromosome 5
Location:226383
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g243050 TRX3,TRXf2,TRXF2 (1 of 1) PTHR10438:SF258 - THIOREDOXIN F1, CHLOROPLASTIC-RELATED; Thioredoxin f2, chloroplastic outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAATAAAGCAGGCAGCCGGCATCGCTGCCTGTCGCTGCCGGTGCCTCG
Internal bar code:TCCTGGGCTATGTGTGGCGTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:3085
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:ACACAGCACAGTTGTCACCA
Suggested primer 2:ATGCATGATGCCGTACCGAT