Insertion junction: CLIP2.062134_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.062134
Chromosome:chromosome 3
Location:1581422
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g152400 EXN1 (1 of 5) 3.1.13.5 - Ribonuclease D / RNase D; 3'-5' exonuclease 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGATGGGACAGAGCGGACCCAGCTGTTGATGAGGGGCGCGTGCGTGCG
Internal bar code:GTCGGCAACGCGATGGGCGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:965
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TCAACCCGCGACAACATGTA
Suggested primer 2:CGGCCTGCCTATAGTTCTGG